Welcome to Chipster

Chipster is a user-friendly analysis software for high-throughput data such as Visium, single-cell and bulk RNA-seq. Chipster provides a web interface to over 500 analysis tools, and the actual analysis jobs run on the server side making use of CSC's computing environment.

If you would like to use Chipster hosted by CSC, you need a user account. Please note that Chipster is also available for local server installation free of charge.

Training:

News and resources:

Maintenance:

  • Wednesday 26.6.2024 9 - 10 (UTC+3) Chipster service break.
  • Tuesday 25.6.2024 9 - 13 (UTC+3) Chipster service break. Cancelled.
  • Wednesday 19.6.2024 9 - 10 (UTC+3) Chipster service break. Update 10:05: completed.