Subset FASTQ

Description

Returns a subsample of N reads from a FASTQ file.

Parameters

• Size of subset (Integer) [100000]
• Random Seed (Integer) [11]

Details

Returns a subsample of N reads from a FASTQ file.

When using paired-end data, use same random seed for both files to keep pairing.

Output

The output is a gzipped FASTQ file.

References

This tool is based on the seqtk package by Heng Li.