Pathways / Hypergeometric test for cytobands


Finds chromosomal locations, i.e., cytobands for which the genes in the selected dataset are either over- or under-represented.



This tool takes a filtered data set and goes through all cytobands. In order to avoid the identification of directly related regions with considerable overlap of genes, this tool uses a method which conditions on all subregions that are themselves significant at a specified p- value cutoff. First the subregions are tested and the genes of the significant subregions are removed before testing the larger regions.


Output is an HTML-file with a list of significant cytobands.