ChIP-seq / Find unique and annotated genes

Description

This tool takes a list of ENSEMBL gene identifiers, removes duplicates and fetches annotation information. The output file is compatible with downstream tools used for example for pathway analysis.

Parameters


Details

In order to fetch annotation information the tool uses ENSEMBL gene identifiers as input, which it converts to entrez gene id:s through the biomaRt interface to ENSEMBL. The output file is compatible with downstream tools used for example for pathway analysis.


Output

The analysis output is a table of annotated genes, which is compatible with downstream tools used for example for pathway analysis.


References

The tool makes use of the following Bioconductor packages: